Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 AC010653.2-201ENST00000623505 997 ntBASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRMT13Q9NUP7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 AC092647.4-201ENST00000457211 535 ntBASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 AL023803.3-201ENST00000615559 522 ntBASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 AC011558.1-201ENST00000623459 338 ntBASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 AC141257.4-201ENST00000634557 245 ntBASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 AC136944.6-201ENST00000634818 245 ntBASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.54■■□□□ 1.04
TRMT13Q9NUP7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRMT13Q9NUP7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 KRT8P8-201ENST00000434750 1448 ntBASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.52■■□□□ 1.04
TRMT13Q9NUP7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.52■■□□□ 1.03
TRMT13Q9NUP7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRMT13Q9NUP7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 AC079834.2-201ENST00000609776 1949 ntBASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRMT13Q9NUP7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 LINC01465-201ENST00000408887 1940 ntBASIC21.5■■□□□ 1.03
TRMT13Q9NUP7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms