Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 C2orf69P4-201ENST00000565394 541 ntBASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 AL589743.5-201ENST00000616611 1050 ntBASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CDC42SE2Q9NRR3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 AL355472.2-201ENST00000422958 438 ntBASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC42SE2Q9NRR3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 AC016769.1-201ENST00000409132 1010 ntBASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE2Q9NRR3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms