Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
A1CFQ9NQ94 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 TERF1P1-201ENST00000311003 1181 ntBASIC22.35■■□□□ 1.17
A1CFQ9NQ94 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
A1CFQ9NQ94 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 KRT18P57-201ENST00000443599 1254 ntBASIC22.34■■□□□ 1.17
A1CFQ9NQ94 SLC25A3P1-201ENST00000443844 931 ntBASIC22.34■■□□□ 1.17
A1CFQ9NQ94 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 AC008040.2-201ENST00000461049 708 ntBASIC22.34■■□□□ 1.17
A1CFQ9NQ94 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 AL445228.2-201ENST00000605589 952 ntBASIC22.34■■□□□ 1.17
A1CFQ9NQ94 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 AC130371.2-201ENST00000619443 611 ntBASIC22.34■■□□□ 1.17
A1CFQ9NQ94 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.34■■□□□ 1.17
A1CFQ9NQ94 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 RCC2P6-201ENST00000526625 1557 ntBASIC22.33■■□□□ 1.17
A1CFQ9NQ94 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 AC073508.3-201ENST00000619697 1419 ntBASIC22.33■■□□□ 1.17
A1CFQ9NQ94 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 AC097488.1-201ENST00000507834 756 ntBASIC22.33■■□□□ 1.17
A1CFQ9NQ94 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.33■■□□□ 1.17
A1CFQ9NQ94 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
A1CFQ9NQ94 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 CRYGFP-201ENST00000418459 633 ntBASIC22.32■■□□□ 1.16
A1CFQ9NQ94 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A1CFQ9NQ94 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 AP001271.2-201ENST00000624018 1556 ntBASIC22.31■■□□□ 1.16
A1CFQ9NQ94 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.31■■□□□ 1.16
A1CFQ9NQ94 C2orf69P3-201ENST00000565542 1120 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms