Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 AC008550.1-201ENST00000511500 884 ntBASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 AC093827.2-201ENST00000512654 315 ntBASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.08■□□□□ 0.81
ATP13A1Q9HD20 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATP13A1Q9HD20 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ATP13A1Q9HD20 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP13A1Q9HD20 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 TUBB8P6-201ENST00000436895 1288 ntBASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 KRT18P16-201ENST00000510337 1294 ntBASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 RARRES2P10-201ENST00000564312 460 ntBASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP13A1Q9HD20 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms