Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TERF1P5-201ENST00000477545 1207 ntBASIC18.68■□□□□ 0.58
PIF1Q9H611 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.68■□□□□ 0.58
PIF1Q9H611 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.68■□□□□ 0.58
PIF1Q9H611 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PIF1Q9H611 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.68■□□□□ 0.58
PIF1Q9H611 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.68■□□□□ 0.58
PIF1Q9H611 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PIF1Q9H611 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PIF1Q9H611 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PIF1Q9H611 KRT16P6-202ENST00000425692 1426 ntBASIC18.67■□□□□ 0.58
PIF1Q9H611 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PIF1Q9H611 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.67■□□□□ 0.58
PIF1Q9H611 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.67■□□□□ 0.58
PIF1Q9H611 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.67■□□□□ 0.58
PIF1Q9H611 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PIF1Q9H611 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PIF1Q9H611 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PIF1Q9H611 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PIF1Q9H611 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PIF1Q9H611 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PIF1Q9H611 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PIF1Q9H611 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PIF1Q9H611 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PIF1Q9H611 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PIF1Q9H611 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PIF1Q9H611 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.66■□□□□ 0.58
PIF1Q9H611 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.66■□□□□ 0.58
PIF1Q9H611 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.66■□□□□ 0.58
PIF1Q9H611 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.66■□□□□ 0.58
PIF1Q9H611 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.66■□□□□ 0.58
PIF1Q9H611 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 AC010536.3-201ENST00000620306 533 ntBASIC18.66■□□□□ 0.58
PIF1Q9H611 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.66■□□□□ 0.58
PIF1Q9H611 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.66■□□□□ 0.58
PIF1Q9H611 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PIF1Q9H611 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIF1Q9H611 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PIF1Q9H611 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.65■□□□□ 0.58
PIF1Q9H611 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PIF1Q9H611 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PIF1Q9H611 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PIF1Q9H611 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.65■□□□□ 0.58
PIF1Q9H611 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.65■□□□□ 0.58
PIF1Q9H611 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.65■□□□□ 0.58
PIF1Q9H611 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PIF1Q9H611 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PIF1Q9H611 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PIF1Q9H611 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PIF1Q9H611 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.64■□□□□ 0.57
PIF1Q9H611 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.64■□□□□ 0.57
PIF1Q9H611 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
PIF1Q9H611 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 AC007613.1-201ENST00000572811 2597 ntBASIC18.64■□□□□ 0.57
PIF1Q9H611 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms