Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBQLN3Q9H347 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBQLN3Q9H347 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 AL158047.1-201ENST00000445918 881 ntBASIC18.14■□□□□ 0.49
UBQLN3Q9H347 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 C1QBPP2-201ENST00000528754 825 ntBASIC18.14■□□□□ 0.49
UBQLN3Q9H347 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN3Q9H347 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UBQLN3Q9H347 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.12■□□□□ 0.49
UBQLN3Q9H347 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AL121829.2-201ENST00000620908 328 ntBASIC18.12■□□□□ 0.49
UBQLN3Q9H347 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AC124283.5-201ENST00000624661 1809 ntBASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.12■□□□□ 0.49
UBQLN3Q9H347 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 AC133681.1-201ENST00000465482 601 ntBASIC18.11■□□□□ 0.49
UBQLN3Q9H347 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms