Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.79■□□□□ 0.6
SPTBN4Q9H254 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPTBN4Q9H254 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 AC027601.4-201ENST00000611259 610 ntBASIC18.78■□□□□ 0.6
SPTBN4Q9H254 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPTBN4Q9H254 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 FAM8A3P-201ENST00000427218 844 ntBASIC18.77■□□□□ 0.6
SPTBN4Q9H254 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 AC138894.3-201ENST00000603787 634 ntBASIC18.77■□□□□ 0.6
SPTBN4Q9H254 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPTBN4Q9H254 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 AC004967.1-201ENST00000453589 447 ntBASIC18.77■□□□□ 0.59
SPTBN4Q9H254 CYMP-203ENST00000474680 1263 ntBASIC18.77■□□□□ 0.59
SPTBN4Q9H254 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.77■□□□□ 0.59
SPTBN4Q9H254 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SPTBN4Q9H254 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 KRT8P36-201ENST00000489121 1440 ntBASIC18.76■□□□□ 0.59
SPTBN4Q9H254 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 SAPCD2P3-201ENST00000455031 850 ntBASIC18.76■□□□□ 0.59
SPTBN4Q9H254 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.76■□□□□ 0.59
SPTBN4Q9H254 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 TSPY22P-201ENST00000427496 604 ntBASIC18.75■□□□□ 0.59
SPTBN4Q9H254 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 AC116351.2-201ENST00000606540 1585 ntBASIC18.75■□□□□ 0.59
SPTBN4Q9H254 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SPTBN4Q9H254 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms