Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 YBX1P10-201ENST00000444752 975 ntBASIC21.48■■□□□ 1.03
TRIM6Q9C030 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6Q9C030 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6Q9C030 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6Q9C030 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6Q9C030 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6Q9C030 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6Q9C030 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM6Q9C030 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRIM6Q9C030 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TRIM6Q9C030 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRIM6Q9C030 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.46■■□□□ 1.03
TRIM6Q9C030 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 AL353708.3-201ENST00000610272 989 ntBASIC21.46■■□□□ 1.03
TRIM6Q9C030 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM6Q9C030 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM6Q9C030 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM6Q9C030 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM6Q9C030 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM6Q9C030 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRIM6Q9C030 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
TRIM6Q9C030 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 BX088651.1-201ENST00000540551 451 ntBASIC21.45■■□□□ 1.02
TRIM6Q9C030 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 AP003071.4-201ENST00000562276 1284 ntBASIC21.45■■□□□ 1.02
TRIM6Q9C030 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM6Q9C030 AP005212.1-201ENST00000581547 1997 ntBASIC21.45■■□□□ 1.02
TRIM6Q9C030 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRIM6Q9C030 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6Q9C030 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6Q9C030 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6Q9C030 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM6Q9C030 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 NIFKP9-201ENST00000419265 221 ntBASIC21.44■■□□□ 1.02
TRIM6Q9C030 TUBB8P6-201ENST00000436895 1288 ntBASIC21.44■■□□□ 1.02
TRIM6Q9C030 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.44■■□□□ 1.02
TRIM6Q9C030 REXO1L12P-201ENST00000622156 912 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms