Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 AC060766.5-201ENST00000590539 871 ntBASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AL020996.1-203ENST00000536896 2307 ntBASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AC142086.2-201ENST00000569753 217 ntBASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AC006557.6-201ENST00000623071 864 ntBASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM54Q9BYV2 AL158211.5-201ENST00000623583 2518 ntBASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM54Q9BYV2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 AC018553.1-201ENST00000616682 1458 ntBASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 PNMA6B-201ENST00000538162 1200 ntBASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM54Q9BYV2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 AC116351.2-201ENST00000606540 1585 ntBASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms