Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
KRTAP4-1Q9BYQ7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 IER3-202ENST00000376377 1350 ntBASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 CCR12P-201ENST00000446203 998 ntBASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC092647.4-201ENST00000457211 535 ntBASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AL353719.1-201ENST00000566847 864 ntBASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC116407.4-201ENST00000623319 1061 ntBASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC012313.10-201ENST00000623509 926 ntBASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 AL121956.5-201ENST00000625261 221 ntBASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP4-1Q9BYQ7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 KRT8P45-201ENST00000414328 1447 ntBASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 AL671277.2-201ENST00000458060 996 ntBASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 PRSS44-201ENST00000515154 1146 ntBASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-1Q9BYQ7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 KRT8P41-201ENST00000533985 1514 ntBASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 ANKRD20A18P-201ENST00000359341 492 ntBASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP4-1Q9BYQ7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms