Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 AL512408.1-201ENST00000569378 2000 ntBASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSBP3Q9BWW4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 LINC01006-201ENST00000333319 2292 ntBASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 AP002982.1-201ENST00000492365 877 ntBASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 AF186192.3-201ENST00000583427 947 ntBASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SSBP3Q9BWW4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 KRT17P2-201ENST00000300992 1314 ntBASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 MIR4785-201ENST00000585005 73 ntBASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 AC113410.3-201ENST00000623366 203 ntBASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3Q9BWW4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 AP001271.2-201ENST00000624018 1556 ntBASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 TSPY7P-201ENST00000431358 1114 ntBASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.3■□□□□ 0.2
SSBP3Q9BWW4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms