Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRNP25Q9BV90 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNRNP25Q9BV90 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRNP25Q9BV90 YBX1P10-201ENST00000444752 975 ntBASIC20.33■□□□□ 0.85
SNRNP25Q9BV90 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.33■□□□□ 0.85
SNRNP25Q9BV90 AC233263.1-201ENST00000578059 224 ntBASIC20.33■□□□□ 0.85
SNRNP25Q9BV90 AC007952.6-201ENST00000573168 2673 ntBASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 AC003957.1-201ENST00000625108 2673 ntBASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SNRNP25Q9BV90 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 AC069544.1-201ENST00000609399 999 ntBASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP25Q9BV90 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 Z82202.1-201ENST00000623446 1880 ntBASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 ESRRAP1-201ENST00000400596 1257 ntBASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 CD99P1-205ENST00000527459 561 ntBASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 MIR4651-201ENST00000582622 73 ntBASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SNRNP25Q9BV90 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 KRT17P3-201ENST00000420566 1262 ntBASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP25Q9BV90 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP25Q9BV90 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms