Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
BPIFA3Q9BQP9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BPIFA3Q9BQP9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
BPIFA3Q9BQP9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 ZNF815P-204ENST00000434898 1737 ntBASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BPIFA3Q9BQP9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 TFP1-202ENST00000475455 1573 ntBASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 AC093525.10-201ENST00000625130 1569 ntBASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 AC137761.2-201ENST00000561729 223 ntBASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 AC145350.3-201ENST00000569033 163 ntBASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 AL031598.1-201ENST00000561511 1773 ntBASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BPIFA3Q9BQP9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 AC079598.2-202ENST00000546624 1451 ntBASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 AC010980.2-201ENST00000587099 1412 ntBASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BPIFA3Q9BQP9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
BPIFA3Q9BQP9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.64■■□□□ 1.06
BPIFA3Q9BQP9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.64■■□□□ 1.06
BPIFA3Q9BQP9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
BPIFA3Q9BQP9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.64■■□□□ 1.05
BPIFA3Q9BQP9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BPIFA3Q9BQP9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BPIFA3Q9BQP9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BPIFA3Q9BQP9 AC005082.1-201ENST00000413042 2259 ntBASIC21.63■■□□□ 1.05
BPIFA3Q9BQP9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BPIFA3Q9BQP9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms