Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF5Q99942 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF5Q99942 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF5Q99942 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF5Q99942 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF5Q99942 AC124283.5-201ENST00000624661 1809 ntBASIC15.68■□□□□ 0.1
RNF5Q99942 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF5Q99942 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF5Q99942 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF5Q99942 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF5Q99942 AL158211.5-201ENST00000623583 2518 ntBASIC15.67■□□□□ 0.1
RNF5Q99942 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RNF5Q99942 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RNF5Q99942 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF5Q99942 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RNF5Q99942 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF5Q99942 AC026366.1-201ENST00000488803 879 ntBASIC15.67■□□□□ 0.1
RNF5Q99942 AP003097.1-201ENST00000530657 1135 ntBASIC15.67■□□□□ 0.1
RNF5Q99942 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF5Q99942 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF5Q99942 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF5Q99942 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RNF5Q99942 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 KRT8P8-201ENST00000434750 1448 ntBASIC15.67■□□□□ 0.1
RNF5Q99942 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RNF5Q99942 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF5Q99942 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF5Q99942 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF5Q99942 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF5Q99942 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF5Q99942 TUBB8P6-201ENST00000436895 1288 ntBASIC15.66■□□□□ 0.1
RNF5Q99942 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF5Q99942 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RNF5Q99942 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF5Q99942 KRT18P16-201ENST00000510337 1294 ntBASIC15.66■□□□□ 0.1
RNF5Q99942 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.66■□□□□ 0.1
RNF5Q99942 RNA5SP413-201ENST00000516373 109 ntBASIC15.66■□□□□ 0.1
RNF5Q99942 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.66■□□□□ 0.1
RNF5Q99942 KRT18P6-201ENST00000555540 1265 ntBASIC15.66■□□□□ 0.1
RNF5Q99942 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF5Q99942 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.66■□□□□ 0.1
RNF5Q99942 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF5Q99942 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF5Q99942 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF5Q99942 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNF5Q99942 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF5Q99942 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF5Q99942 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF5Q99942 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF5Q99942 AC008403.3-201ENST00000598924 454 ntBASIC15.65■□□□□ 0.1
RNF5Q99942 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNF5Q99942 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF5Q99942 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNF5Q99942 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF5Q99942 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
RNF5Q99942 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RNF5Q99942 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF5Q99942 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RNF5Q99942 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF5Q99942 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF5Q99942 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.64■□□□□ 0.09
RNF5Q99942 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF5Q99942 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF5Q99942 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF5Q99942 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms