Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 AC008687.6-201ENST00000596318 630 ntBASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 AC120498.8-201ENST00000614275 531 ntBASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HIST1H2AJQ99878 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 AC124283.5-201ENST00000624661 1809 ntBASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H2AJQ99878 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 TREX1-205ENST00000625293 1783 ntBASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 UNC93B4-201ENST00000505679 747 ntBASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H2AJQ99878 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H2AJQ99878 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H2AJQ99878 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H2AJQ99878 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H2AJQ99878 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H2AJQ99878 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms