Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
LITAFQ99732 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.04□□□□□ -0.32
LITAFQ99732 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.04□□□□□ -0.32
LITAFQ99732 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.04□□□□□ -0.32
LITAFQ99732 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.04□□□□□ -0.32
LITAFQ99732 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.04□□□□□ -0.32
LITAFQ99732 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LITAFQ99732 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.04□□□□□ -0.32
LITAFQ99732 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.04□□□□□ -0.32
LITAFQ99732 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LITAFQ99732 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LITAFQ99732 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LITAFQ99732 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LITAFQ99732 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.03□□□□□ -0.32
LITAFQ99732 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.03□□□□□ -0.32
LITAFQ99732 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.03□□□□□ -0.32
LITAFQ99732 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LITAFQ99732 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LITAFQ99732 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LITAFQ99732 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
LITAFQ99732 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.02□□□□□ -0.32
LITAFQ99732 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.02□□□□□ -0.32
LITAFQ99732 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LITAFQ99732 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.02□□□□□ -0.32
LITAFQ99732 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.02□□□□□ -0.32
LITAFQ99732 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LITAFQ99732 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.02□□□□□ -0.33
LITAFQ99732 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.02□□□□□ -0.33
LITAFQ99732 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.02□□□□□ -0.33
LITAFQ99732 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 AC007322.3-201ENST00000426526 701 ntBASIC13.02□□□□□ -0.33
LITAFQ99732 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.02□□□□□ -0.33
LITAFQ99732 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.02□□□□□ -0.33
LITAFQ99732 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 AC012313.1-201ENST00000593393 3059 ntBASIC13.02□□□□□ -0.33
LITAFQ99732 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LITAFQ99732 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.02□□□□□ -0.33
LITAFQ99732 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LITAFQ99732 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.02□□□□□ -0.33
LITAFQ99732 KRT16P6-202ENST00000425692 1426 ntBASIC13.02□□□□□ -0.33
LITAFQ99732 KRT8P17-201ENST00000453110 1448 ntBASIC13.02□□□□□ -0.33
LITAFQ99732 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.02□□□□□ -0.33
LITAFQ99732 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LITAFQ99732 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
LITAFQ99732 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LITAFQ99732 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LITAFQ99732 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms