Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.73■□□□□ 0.43
SPENQ96T58 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SPENQ96T58 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPENQ96T58 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.73■□□□□ 0.43
SPENQ96T58 AC018553.1-201ENST00000616682 1458 ntBASIC17.73■□□□□ 0.43
SPENQ96T58 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPENQ96T58 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPENQ96T58 AC069148.1-201ENST00000608741 768 ntBASIC17.73■□□□□ 0.43
SPENQ96T58 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SPENQ96T58 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.72■□□□□ 0.43
SPENQ96T58 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 AC128688.1-201ENST00000487626 519 ntBASIC17.72■□□□□ 0.43
SPENQ96T58 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.72■□□□□ 0.43
SPENQ96T58 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SPENQ96T58 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SPENQ96T58 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 AC112907.3-201ENST00000577781 2400 ntBASIC17.72■□□□□ 0.43
SPENQ96T58 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.72■□□□□ 0.43
SPENQ96T58 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.72■□□□□ 0.43
SPENQ96T58 AC008622.2-201ENST00000617006 1229 ntBASIC17.72■□□□□ 0.43
SPENQ96T58 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SPENQ96T58 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SPENQ96T58 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.72■□□□□ 0.43
SPENQ96T58 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SPENQ96T58 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPENQ96T58 SPDYE13P-201ENST00000445314 798 ntBASIC17.71■□□□□ 0.43
SPENQ96T58 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.71■□□□□ 0.43
SPENQ96T58 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.71■□□□□ 0.43
SPENQ96T58 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 SPDYE15P-201ENST00000424157 909 ntBASIC17.71■□□□□ 0.43
SPENQ96T58 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.71■□□□□ 0.43
SPENQ96T58 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.71■□□□□ 0.43
SPENQ96T58 C2orf69P3-201ENST00000565542 1120 ntBASIC17.71■□□□□ 0.43
SPENQ96T58 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.71■□□□□ 0.43
SPENQ96T58 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.71■□□□□ 0.43
SPENQ96T58 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPENQ96T58 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.71■□□□□ 0.43
SPENQ96T58 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.71■□□□□ 0.43
SPENQ96T58 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SPENQ96T58 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SPENQ96T58 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.7■□□□□ 0.42
SPENQ96T58 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.7■□□□□ 0.42
SPENQ96T58 KRT18P38-201ENST00000449496 1282 ntBASIC17.7■□□□□ 0.42
SPENQ96T58 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.7■□□□□ 0.42
SPENQ96T58 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SPENQ96T58 AC116351.2-201ENST00000606540 1585 ntBASIC17.7■□□□□ 0.42
SPENQ96T58 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SPENQ96T58 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SPENQ96T58 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.7■□□□□ 0.42
SPENQ96T58 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SPENQ96T58 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SPENQ96T58 CLEC4GP1-201ENST00000596555 870 ntBASIC17.7■□□□□ 0.42
SPENQ96T58 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 HYMAI.1-201ENST00000620949 238 ntBASIC17.7■□□□□ 0.42
SPENQ96T58 HLA-A-209ENST00000638375 975 ntBASIC17.7■□□□□ 0.42
SPENQ96T58 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.7■□□□□ 0.42
SPENQ96T58 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.7■□□□□ 0.42
SPENQ96T58 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPENQ96T58 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPENQ96T58 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPENQ96T58 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SPENQ96T58 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.69■□□□□ 0.42
SPENQ96T58 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPENQ96T58 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.69■□□□□ 0.42
SPENQ96T58 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPENQ96T58 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.69■□□□□ 0.42
SPENQ96T58 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.69■□□□□ 0.42
SPENQ96T58 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SPENQ96T58 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms