Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.33■□□□□ 0.85
CDK5RAP1Q96SZ6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.33■□□□□ 0.84
CDK5RAP1Q96SZ6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK5RAP1Q96SZ6 AL391422.3-201ENST00000603791 2761 ntBASIC20.33■□□□□ 0.84
CDK5RAP1Q96SZ6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CDK5RAP1Q96SZ6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 AL157384.1-201ENST00000445995 2473 ntBASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.32■□□□□ 0.84
CDK5RAP1Q96SZ6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 AC116562.2-201ENST00000507042 360 ntBASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 AC073912.3-201ENST00000624414 853 ntBASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK5RAP1Q96SZ6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 HLA-A-209ENST00000638375 975 ntBASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms