Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A4EQ96PG1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 AC093484.2-201ENST00000580996 2166 ntBASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 UNC93B4-201ENST00000505679 747 ntBASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 UNC93B5-201ENST00000530315 699 ntBASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
MS4A4EQ96PG1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A4EQ96PG1 AP006587.1-201ENST00000534129 1502 ntBASIC18.27■□□□□ 0.51
MS4A4EQ96PG1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A4EQ96PG1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A4EQ96PG1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
MS4A4EQ96PG1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A4EQ96PG1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 AC007952.6-201ENST00000573168 2673 ntBASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 AC003957.1-201ENST00000625108 2673 ntBASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 YBX1P10-201ENST00000444752 975 ntBASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 AL121829.2-201ENST00000620908 328 ntBASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.26■□□□□ 0.51
MS4A4EQ96PG1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 RNA5SP413-201ENST00000516373 109 ntBASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.25■□□□□ 0.51
MS4A4EQ96PG1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 AIRN-201ENST00000601203 4374 ntBASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms