Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 NEFHP1-201ENST00000412845 2629 ntBASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 AL032819.2-201ENST00000624543 2162 ntBASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40AQ8WXH6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 MKRN4P-201ENST00000444706 1521 ntBASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 FAM21FP-204ENST00000608637 956 ntBASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB40AQ8WXH6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 CDV3P1-201ENST00000471403 739 ntBASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 AC016405.3-201ENST00000607710 860 ntBASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40AQ8WXH6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms