Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 TSPY14P-201ENST00000303979 915 ntBASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 AC131212.4-201ENST00000623606 975 ntBASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 LINC01521-201ENST00000504184 1943 ntBASIC30.24■■■□□ 2.43
CCNB3Q8WWL7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 AL391422.3-201ENST00000603791 2761 ntBASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 HLA-A-209ENST00000638375 975 ntBASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNB3Q8WWL7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 RCC2P6-201ENST00000526625 1557 ntBASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 DUX4L26-201ENST00000489078 1255 ntBASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 EGLN1P1-201ENST00000531623 762 ntBASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 AL691432.2-201ENST00000607222 2038 ntBASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCNB3Q8WWL7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 AC097488.1-201ENST00000507834 756 ntBASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNB3Q8WWL7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCNB3Q8WWL7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCNB3Q8WWL7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC30.2■■■□□ 2.43
CCNB3Q8WWL7 AC006011.2-201ENST00000621313 1158 ntBASIC30.2■■■□□ 2.43
CCNB3Q8WWL7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCNB3Q8WWL7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
CCNB3Q8WWL7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC30.2■■■□□ 2.42
CCNB3Q8WWL7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCNB3Q8WWL7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCNB3Q8WWL7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 AC104076.2-201ENST00000448912 469 ntBASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 ECEL1P2-202ENST00000465689 757 ntBASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCNB3Q8WWL7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 CRYGFP-201ENST00000418459 633 ntBASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 FAM87A-204ENST00000613235 858 ntBASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCNB3Q8WWL7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms