Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 SLC7A5P1-201ENST00000568957 537 ntBASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.46■□□□□ 0.71
CKAP2Q8WWK9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 AC020916.1-201ENST00000587762 1774 ntBASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 KRT8P20-201ENST00000423953 1409 ntBASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.45■□□□□ 0.7
CKAP2Q8WWK9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 Z98044.1-201ENST00000632503 1764 ntBASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 AP000997.3-201ENST00000623333 2250 ntBASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKAP2Q8WWK9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 PHGDH-210ENST00000641115 1638 ntBASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKAP2Q8WWK9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 CYP21A1P-202ENST00000354927 1481 ntBASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms