Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RNF139Q8WU17 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF139Q8WU17 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF139Q8WU17 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF139Q8WU17 KRT16P5-201ENST00000455284 522 ntBASIC20.58■□□□□ 0.89
RNF139Q8WU17 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF139Q8WU17 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF139Q8WU17 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF139Q8WU17 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF139Q8WU17 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF139Q8WU17 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF139Q8WU17 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF139Q8WU17 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 AFG3L1P-217ENST00000557444 2447 ntBASIC20.57■□□□□ 0.88
RNF139Q8WU17 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF139Q8WU17 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF139Q8WU17 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF139Q8WU17 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF139Q8WU17 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF139Q8WU17 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF139Q8WU17 AC093827.2-201ENST00000512654 315 ntBASIC20.56■□□□□ 0.88
RNF139Q8WU17 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF139Q8WU17 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF139Q8WU17 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF139Q8WU17 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF139Q8WU17 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF139Q8WU17 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF139Q8WU17 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF139Q8WU17 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF139Q8WU17 YBX1P10-201ENST00000444752 975 ntBASIC20.55■□□□□ 0.88
RNF139Q8WU17 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF139Q8WU17 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 AC008550.1-201ENST00000511500 884 ntBASIC20.55■□□□□ 0.88
RNF139Q8WU17 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF139Q8WU17 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF139Q8WU17 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 TMEM179-206ENST00000616017 1645 ntBASIC20.54■□□□□ 0.88
RNF139Q8WU17 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 MIR718-201ENST00000390190 70 ntBASIC20.54■□□□□ 0.88
RNF139Q8WU17 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF139Q8WU17 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF139Q8WU17 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms