Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 AC116351.2-201ENST00000606540 1585 ntBASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 AC006557.6-201ENST00000623071 864 ntBASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAF3IP1Q8TDR0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF3IP1Q8TDR0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF3IP1Q8TDR0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF3IP1Q8TDR0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 AC092368.3-202ENST00000574180 1591 ntBASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP1Q8TDR0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 AL138781.1-201ENST00000566567 1274 ntBASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAF3IP1Q8TDR0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 AC090192.1-201ENST00000517740 490 ntBASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 MYC-209ENST00000641252 345 ntBASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP1Q8TDR0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 HLA-B-256ENST00000639848 1089 ntBASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRAF3IP1Q8TDR0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms