Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDND2Q8NHS1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDND2Q8NHS1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CLDND2Q8NHS1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDND2Q8NHS1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDND2Q8NHS1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
CLDND2Q8NHS1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLDND2Q8NHS1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLDND2Q8NHS1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 SMG8-203ENST00000578922 2178 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 PTBP1P-201ENST00000554374 1601 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 AL031963.3-201ENST00000606441 850 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 AC113410.3-201ENST00000623366 203 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 AC073912.3-201ENST00000624414 853 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 AC018445.3-201ENST00000624177 1945 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 KRT17P2-201ENST00000300992 1314 ntBASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CLDND2Q8NHS1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 KRT8P20-201ENST00000423953 1409 ntBASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 FP700111.2-201ENST00000619190 1892 ntBASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 NBPF21P-201ENST00000425093 1451 ntBASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDND2Q8NHS1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms