Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPEB3Q8NE35 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 AL158211.5-201ENST00000623583 2518 ntBASIC17.13■□□□□ 0.33
CPEB3Q8NE35 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 POU5F1P3-201ENST00000428824 1078 ntBASIC17.13■□□□□ 0.33
CPEB3Q8NE35 TSPY20P-201ENST00000450910 630 ntBASIC17.13■□□□□ 0.33
CPEB3Q8NE35 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 AC006058.3-201ENST00000606217 1069 ntBASIC17.13■□□□□ 0.33
CPEB3Q8NE35 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPEB3Q8NE35 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPEB3Q8NE35 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.11■□□□□ 0.33
CPEB3Q8NE35 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 MTDHP1-201ENST00000605323 784 ntBASIC17.11■□□□□ 0.33
CPEB3Q8NE35 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 AC073648.6-201ENST00000641589 218 ntBASIC17.11■□□□□ 0.33
CPEB3Q8NE35 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPEB3Q8NE35 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 TREX1-205ENST00000625293 1783 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms