Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC197Q8NCU1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 DUX4L19-201ENST00000557448 1267 ntBASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC197Q8NCU1 KRT16P2-201ENST00000414673 1423 ntBASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 Z98044.1-201ENST00000632503 1764 ntBASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC197Q8NCU1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC197Q8NCU1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 AP001271.2-201ENST00000624018 1556 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms