Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 AC131212.4-201ENST00000623606 975 ntBASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC38A9Q8NBW4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 AP001271.2-201ENST00000624018 1556 ntBASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A9Q8NBW4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 GABARAPL3-202ENST00000624044 1851 ntBASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 LINC01568-207ENST00000641790 1380 ntBASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 AC008040.2-201ENST00000461049 708 ntBASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 NAPSB-206ENST00000562112 1266 ntBASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 RN7SL850P-201ENST00000579959 291 ntBASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 AC130371.2-201ENST00000619443 611 ntBASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SLC38A9Q8NBW4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.46■□□□□ 0.54
SLC38A9Q8NBW4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SLC38A9Q8NBW4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.46■□□□□ 0.54
SLC38A9Q8NBW4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A9Q8NBW4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms