Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 AL353807.1-201ENST00000427475 662 ntBASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 AC008550.1-201ENST00000511500 884 ntBASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.7
TRAM1L1Q8N609 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAM1L1Q8N609 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRAM1L1Q8N609 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.39■□□□□ 0.7
TRAM1L1Q8N609 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAM1L1Q8N609 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAM1L1Q8N609 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 PCDHAC2-203ENST00000615316 3011 ntBASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAM1L1Q8N609 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 MIR718-201ENST00000390190 70 ntBASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 AC012618.2-201ENST00000428058 849 ntBASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 AL353708.3-201ENST00000610272 989 ntBASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 AC066615.1-201ENST00000640911 628 ntBASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1L1Q8N609 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 RPS2P55-201ENST00000397318 883 ntBASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 AC107956.1-201ENST00000494359 873 ntBASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 AF186192.3-201ENST00000583427 947 ntBASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAM1L1Q8N609 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms