Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 AL445228.2-201ENST00000605589 952 ntBASIC21.22■□□□□ 0.99
VPS52Q8N1B4 LINC01006-201ENST00000333319 2292 ntBASIC21.22■□□□□ 0.99
VPS52Q8N1B4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS52Q8N1B4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 AC005363.2-201ENST00000618631 242 ntBASIC21.21■□□□□ 0.99
VPS52Q8N1B4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS52Q8N1B4 KRT8P17-201ENST00000453110 1448 ntBASIC21.21■□□□□ 0.99
VPS52Q8N1B4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.2■□□□□ 0.99
VPS52Q8N1B4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.99
VPS52Q8N1B4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 KRT16P1-201ENST00000399124 1418 ntBASIC21.2■□□□□ 0.98
VPS52Q8N1B4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.2■□□□□ 0.98
VPS52Q8N1B4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 AL390955.1-201ENST00000428694 934 ntBASIC21.19■□□□□ 0.98
VPS52Q8N1B4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 AC116562.2-201ENST00000507042 360 ntBASIC21.19■□□□□ 0.98
VPS52Q8N1B4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 AC092865.7-201ENST00000641832 219 ntBASIC21.19■□□□□ 0.98
VPS52Q8N1B4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS52Q8N1B4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 LINC01568-207ENST00000641790 1380 ntBASIC21.18■□□□□ 0.98
VPS52Q8N1B4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS52Q8N1B4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 KRT18P35-201ENST00000510488 1269 ntBASIC21.17■□□□□ 0.98
VPS52Q8N1B4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS52Q8N1B4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms