Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 STARP1-201ENST00000397973 869 ntBASIC27.35■■□□□ 1.97
XRN1Q8IZH2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
XRN1Q8IZH2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC27.35■■□□□ 1.97
XRN1Q8IZH2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC27.35■■□□□ 1.97
XRN1Q8IZH2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
XRN1Q8IZH2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
XRN1Q8IZH2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
XRN1Q8IZH2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 FXN-203ENST00000396366 922 ntTSL 2 BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC27.34■■□□□ 1.97
XRN1Q8IZH2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 NEK4P2-201ENST00000580004 1012 ntBASIC27.34■■□□□ 1.97
XRN1Q8IZH2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
XRN1Q8IZH2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 AL160286.2-201ENST00000567150 934 ntBASIC27.33■■□□□ 1.97
XRN1Q8IZH2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
XRN1Q8IZH2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC27.33■■□□□ 1.96
XRN1Q8IZH2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
XRN1Q8IZH2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC27.33■■□□□ 1.96
XRN1Q8IZH2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.96
XRN1Q8IZH2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
XRN1Q8IZH2 AL031432.5-201ENST00000641059 760 ntBASIC27.33■■□□□ 1.96
XRN1Q8IZH2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
XRN1Q8IZH2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 AP000523.1-201ENST00000398242 1049 ntBASIC27.31■■□□□ 1.96
XRN1Q8IZH2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC27.31■■□□□ 1.96
XRN1Q8IZH2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
XRN1Q8IZH2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 AC006128.1-201ENST00000624704 1661 ntBASIC27.3■■□□□ 1.96
XRN1Q8IZH2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 AC246785.2-201ENST00000432512 513 ntBASIC27.3■■□□□ 1.96
XRN1Q8IZH2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 BX119927.1-201ENST00000636596 1552 ntBASIC27.3■■□□□ 1.96
XRN1Q8IZH2 FBXW4P1-201ENST00000426721 2239 ntBASIC27.3■■□□□ 1.96
XRN1Q8IZH2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
XRN1Q8IZH2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms