Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF440Q8IYI8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZNF440Q8IYI8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF440Q8IYI8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 ID1-201ENST00000376105 1233 ntBASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 AC124283.5-201ENST00000624661 1809 ntBASIC17.91■□□□□ 0.46
ZNF440Q8IYI8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 UNC93B4-201ENST00000505679 747 ntBASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF440Q8IYI8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF440Q8IYI8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF440Q8IYI8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 AC116562.4-201ENST00000641316 2276 ntBASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF440Q8IYI8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF440Q8IYI8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms