Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMC5Q8IY18 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SMC5Q8IY18 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SMC5Q8IY18 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 AC120498.8-201ENST00000614275 531 ntBASIC24.27■■□□□ 1.48
SMC5Q8IY18 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMC5Q8IY18 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMC5Q8IY18 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SMC5Q8IY18 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMC5Q8IY18 ZNF815P-204ENST00000434898 1737 ntBASIC24.27■■□□□ 1.48
SMC5Q8IY18 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.26■■□□□ 1.47
SMC5Q8IY18 LINC01465-201ENST00000408887 1940 ntBASIC24.26■■□□□ 1.47
SMC5Q8IY18 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.26■■□□□ 1.47
SMC5Q8IY18 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SMC5Q8IY18 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMC5Q8IY18 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMC5Q8IY18 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMC5Q8IY18 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMC5Q8IY18 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMC5Q8IY18 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 AC133041.1-202ENST00000642053 222 ntBASIC24.25■■□□□ 1.47
SMC5Q8IY18 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMC5Q8IY18 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMC5Q8IY18 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.25■■□□□ 1.47
SMC5Q8IY18 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 AL121906.2-201ENST00000621597 723 ntBASIC24.24■■□□□ 1.47
SMC5Q8IY18 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMC5Q8IY18 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SMC5Q8IY18 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 YBX1P10-201ENST00000444752 975 ntBASIC24.23■■□□□ 1.47
SMC5Q8IY18 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.23■■□□□ 1.47
SMC5Q8IY18 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.23■■□□□ 1.47
SMC5Q8IY18 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SMC5Q8IY18 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC24.23■■□□□ 1.47
SMC5Q8IY18 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 TEX21P-204ENST00000641479 1693 ntBASIC24.22■■□□□ 1.47
SMC5Q8IY18 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms