Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 AC104417.2-201ENST00000562989 1793 ntBASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H3Q8IXZ2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.28■■□□□ 1
ZC3H3Q8IXZ2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.27■■□□□ 1
ZC3H3Q8IXZ2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.27■□□□□ 0.99
ZC3H3Q8IXZ2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 AP003097.1-201ENST00000530657 1135 ntBASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.26■□□□□ 0.99
ZC3H3Q8IXZ2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H3Q8IXZ2 TEX21P-204ENST00000641479 1693 ntBASIC21.24■□□□□ 0.99
ZC3H3Q8IXZ2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
ZC3H3Q8IXZ2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H3Q8IXZ2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms