Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.78■■□□□ 1.08
DHX40Q8IX18 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DHX40Q8IX18 AC104581.1-202ENST00000635932 2618 ntBASIC21.77■■□□□ 1.08
DHX40Q8IX18 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DHX40Q8IX18 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.77■■□□□ 1.08
DHX40Q8IX18 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DHX40Q8IX18 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.77■■□□□ 1.08
DHX40Q8IX18 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
DHX40Q8IX18 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.77■■□□□ 1.08
DHX40Q8IX18 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DHX40Q8IX18 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
DHX40Q8IX18 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
DHX40Q8IX18 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.77■■□□□ 1.08
DHX40Q8IX18 CYP2T3P-201ENST00000601990 817 ntBASIC21.77■■□□□ 1.08
DHX40Q8IX18 AC080038.1-201ENST00000611274 1154 ntBASIC21.77■■□□□ 1.08
DHX40Q8IX18 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
DHX40Q8IX18 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DHX40Q8IX18 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DHX40Q8IX18 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DHX40Q8IX18 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 AL355472.2-201ENST00000422958 438 ntBASIC21.76■■□□□ 1.07
DHX40Q8IX18 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.76■■□□□ 1.07
DHX40Q8IX18 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DHX40Q8IX18 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 AC009113.1-201ENST00000570267 2443 ntBASIC21.75■■□□□ 1.07
DHX40Q8IX18 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 AC023632.3-201ENST00000521633 145 ntBASIC21.75■■□□□ 1.07
DHX40Q8IX18 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DHX40Q8IX18 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.75■■□□□ 1.07
DHX40Q8IX18 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.74■■□□□ 1.07
DHX40Q8IX18 AC141586.3-201ENST00000562166 1838 ntBASIC21.74■■□□□ 1.07
DHX40Q8IX18 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
DHX40Q8IX18 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 AC005082.1-201ENST00000413042 2259 ntBASIC21.74■■□□□ 1.07
DHX40Q8IX18 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.74■■□□□ 1.07
DHX40Q8IX18 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DHX40Q8IX18 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.74■■□□□ 1.07
DHX40Q8IX18 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.74■■□□□ 1.07
DHX40Q8IX18 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms