Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 TFP1-202ENST00000475455 1573 ntBASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 AP002982.1-201ENST00000492365 877 ntBASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM48Q8IWZ4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM48Q8IWZ4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 YBX1P10-201ENST00000444752 975 ntBASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 AL512408.1-201ENST00000569378 2000 ntBASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM48Q8IWZ4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 TSPY7P-201ENST00000431358 1114 ntBASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms