Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
APLFQ8IW19 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
APLFQ8IW19 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
APLFQ8IW19 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.35■□□□□ 0.69
APLFQ8IW19 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APLFQ8IW19 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APLFQ8IW19 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
APLFQ8IW19 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
APLFQ8IW19 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
APLFQ8IW19 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.34■□□□□ 0.69
APLFQ8IW19 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.34■□□□□ 0.69
APLFQ8IW19 AC091799.1-201ENST00000422823 811 ntBASIC19.34■□□□□ 0.69
APLFQ8IW19 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.34■□□□□ 0.69
APLFQ8IW19 CDV3P1-201ENST00000471403 739 ntBASIC19.34■□□□□ 0.69
APLFQ8IW19 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.34■□□□□ 0.69
APLFQ8IW19 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.34■□□□□ 0.69
APLFQ8IW19 AC073648.6-201ENST00000641589 218 ntBASIC19.34■□□□□ 0.69
APLFQ8IW19 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
APLFQ8IW19 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
APLFQ8IW19 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.34■□□□□ 0.69
APLFQ8IW19 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.34■□□□□ 0.69
APLFQ8IW19 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APLFQ8IW19 AL512408.1-201ENST00000569378 2000 ntBASIC19.34■□□□□ 0.69
APLFQ8IW19 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APLFQ8IW19 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APLFQ8IW19 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APLFQ8IW19 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
APLFQ8IW19 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APLFQ8IW19 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APLFQ8IW19 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APLFQ8IW19 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.33■□□□□ 0.68
APLFQ8IW19 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.33■□□□□ 0.68
APLFQ8IW19 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 CYP2T3P-201ENST00000601990 817 ntBASIC19.33■□□□□ 0.68
APLFQ8IW19 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
APLFQ8IW19 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
APLFQ8IW19 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.33■□□□□ 0.68
APLFQ8IW19 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
APLFQ8IW19 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APLFQ8IW19 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
APLFQ8IW19 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.32■□□□□ 0.68
APLFQ8IW19 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.32■□□□□ 0.68
APLFQ8IW19 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 KRT17P1-201ENST00000399211 1546 ntBASIC19.32■□□□□ 0.68
APLFQ8IW19 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.32■□□□□ 0.68
APLFQ8IW19 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.32■□□□□ 0.68
APLFQ8IW19 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.32■□□□□ 0.68
APLFQ8IW19 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
APLFQ8IW19 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.32■□□□□ 0.68
APLFQ8IW19 AC245052.3-201ENST00000450182 901 ntBASIC19.32■□□□□ 0.68
APLFQ8IW19 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.32■□□□□ 0.68
APLFQ8IW19 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 AC060766.5-201ENST00000590539 871 ntBASIC19.32■□□□□ 0.68
APLFQ8IW19 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.32■□□□□ 0.68
APLFQ8IW19 HLA-B-256ENST00000639848 1089 ntBASIC19.32■□□□□ 0.68
APLFQ8IW19 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.32■□□□□ 0.68
APLFQ8IW19 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.32■□□□□ 0.68
APLFQ8IW19 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.32■□□□□ 0.68
APLFQ8IW19 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.32■□□□□ 0.68
APLFQ8IW19 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APLFQ8IW19 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APLFQ8IW19 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APLFQ8IW19 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APLFQ8IW19 AP000997.3-201ENST00000623333 2250 ntBASIC19.31■□□□□ 0.68
APLFQ8IW19 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.31■□□□□ 0.68
APLFQ8IW19 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms