Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 AC138932.1-201ENST00000534164 6830 ntBASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 AC116351.2-201ENST00000606540 1585 ntBASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LINC00346Q8IVM7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 AC098934.4-201ENST00000564127 592 ntBASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 AC005829.2-201ENST00000571422 1056 ntBASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00346Q8IVM7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 MIR4758-201ENST00000577688 71 ntBASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00346Q8IVM7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 Z82202.1-201ENST00000623446 1880 ntBASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 AL138781.1-201ENST00000566567 1274 ntBASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC00346Q8IVM7 AC098818.2-201ENST00000564925 2320 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms