Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 LINC01023-201ENST00000606054 436 ntBASIC18.68■□□□□ 0.58
RAB43Q86YS6 AL031963.3-201ENST00000606441 850 ntBASIC18.68■□□□□ 0.58
RAB43Q86YS6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RAB43Q86YS6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB43Q86YS6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 AC124283.5-201ENST00000624661 1809 ntBASIC18.67■□□□□ 0.58
RAB43Q86YS6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 KRT8P20-201ENST00000423953 1409 ntBASIC18.67■□□□□ 0.58
RAB43Q86YS6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 HTR7P1-201ENST00000538670 1336 ntBASIC18.67■□□□□ 0.58
RAB43Q86YS6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB43Q86YS6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAB43Q86YS6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 ECEL1P3-201ENST00000427961 737 ntBASIC18.66■□□□□ 0.58
RAB43Q86YS6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB43Q86YS6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB43Q86YS6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RAB43Q86YS6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB43Q86YS6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB43Q86YS6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB43Q86YS6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB43Q86YS6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB43Q86YS6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB43Q86YS6 AC211429.1-201ENST00000415277 523 ntBASIC18.65■□□□□ 0.58
RAB43Q86YS6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB43Q86YS6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB43Q86YS6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB43Q86YS6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms