Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 AL353708.3-201ENST00000610272 989 ntBASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM4Q86VH4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 AC113410.3-201ENST00000623366 203 ntBASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRTM4Q86VH4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 NIFKP9-201ENST00000419265 221 ntBASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 AL596275.1-201ENST00000423464 877 ntBASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 AC073195.1-201ENST00000607241 877 ntBASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 KRT8P8-201ENST00000434750 1448 ntBASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRRTM4Q86VH4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 SNORA78-201ENST00000459373 127 ntBASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 MIR4497-201ENST00000583208 89 ntBASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM4Q86VH4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms