Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AP001271.2-201ENST00000624018 1556 ntBASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 AC005181.1-201ENST00000604782 1256 ntBASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 AC010980.2-201ENST00000587099 1412 ntBASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.59□□□□□ -0.39
MRPL55Q7Z7F7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 AL355472.2-201ENST00000422958 438 ntBASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 C2orf69P4-201ENST00000565394 541 ntBASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
MRPL55Q7Z7F7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 AC116562.4-201ENST00000641316 2276 ntBASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 LSM12P1-201ENST00000411836 588 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms