Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 AF106564.1-201ENST00000607058 2553 ntBASIC16.59■□□□□ 0.25
CSMD2Q7Z408 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD2Q7Z408 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 AP000523.1-201ENST00000398242 1049 ntBASIC16.58■□□□□ 0.24
CSMD2Q7Z408 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD2Q7Z408 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 ZNF444P1-201ENST00000559497 298 ntBASIC16.57■□□□□ 0.24
CSMD2Q7Z408 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.57■□□□□ 0.24
CSMD2Q7Z408 AL645929.1-201ENST00000420084 975 ntBASIC16.57■□□□□ 0.24
CSMD2Q7Z408 AP003041.3-201ENST00000527151 707 ntBASIC16.57■□□□□ 0.24
CSMD2Q7Z408 AL353719.1-201ENST00000566847 864 ntBASIC16.57■□□□□ 0.24
CSMD2Q7Z408 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 RNA5SP419-201ENST00000515908 135 ntBASIC16.56■□□□□ 0.24
CSMD2Q7Z408 AC011298.2-201ENST00000617989 482 ntBASIC16.56■□□□□ 0.24
CSMD2Q7Z408 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSMD2Q7Z408 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.55■□□□□ 0.24
CSMD2Q7Z408 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms