Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTL4Q6ZR62 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 SMG8-203ENST00000578922 2178 ntBASIC18.33■□□□□ 0.52
RTL4Q6ZR62 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 TCF3P1-201ENST00000423021 1937 ntBASIC18.33■□□□□ 0.52
RTL4Q6ZR62 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL4Q6ZR62 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 AC239809.2-201ENST00000415381 517 ntBASIC18.32■□□□□ 0.52
RTL4Q6ZR62 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 AL121829.2-201ENST00000620908 328 ntBASIC18.32■□□□□ 0.52
RTL4Q6ZR62 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL4Q6ZR62 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 AC093827.2-201ENST00000512654 315 ntBASIC18.31■□□□□ 0.52
RTL4Q6ZR62 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 AL121906.2-201ENST00000621597 723 ntBASIC18.31■□□□□ 0.52
RTL4Q6ZR62 AL023875.1-201ENST00000640777 796 ntBASIC18.31■□□□□ 0.52
RTL4Q6ZR62 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms