Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 AL161938.1-201ENST00000569833 2180 ntBASIC12.42□□□□□ -0.42
LINC00575Q6W349 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 HTR7P1-202ENST00000624664 4411 ntBASIC12.41□□□□□ -0.42
LINC00575Q6W349 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 AL133373.2-201ENST00000623187 2828 ntBASIC12.41□□□□□ -0.42
LINC00575Q6W349 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00575Q6W349 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00575Q6W349 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 NOC2LP2-201ENST00000407594 1944 ntBASIC12.4□□□□□ -0.42
LINC00575Q6W349 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 AP000997.3-201ENST00000623333 2250 ntBASIC12.4□□□□□ -0.42
LINC00575Q6W349 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00575Q6W349 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LINC00575Q6W349 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 WIZP1-201ENST00000531444 2299 ntBASIC12.39□□□□□ -0.43
LINC00575Q6W349 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms