Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
KCNIP4Q6PIL6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
KCNIP4Q6PIL6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KCNIP4Q6PIL6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KCNIP4Q6PIL6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 AC055733.4-201ENST00000638462 1354 ntBASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.17■□□□□ 0.02
KCNIP4Q6PIL6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KCNIP4Q6PIL6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KCNIP4Q6PIL6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KCNIP4Q6PIL6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms