Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 AC012306.2-201ENST00000609350 630 ntBASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 AP001271.2-201ENST00000624018 1556 ntBASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 AL162377.1-201ENST00000618844 1793 ntBASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 RBM17P1-201ENST00000453646 1190 ntBASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 AC097493.4-201ENST00000641197 219 ntBASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 AL031985.4-201ENST00000642138 673 ntBASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H3F3CQ6NXT2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 TMEM179-206ENST00000616017 1645 ntBASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 MMP23A-201ENST00000234610 1017 ntBASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 UNC93B2-201ENST00000285383 730 ntBASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.09■□□□□ 0.49
H3F3CQ6NXT2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
H3F3CQ6NXT2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
H3F3CQ6NXT2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H3F3CQ6NXT2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
H3F3CQ6NXT2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
H3F3CQ6NXT2 GABARAPL3-202ENST00000624044 1851 ntBASIC18.08■□□□□ 0.49
H3F3CQ6NXT2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.08■□□□□ 0.49
H3F3CQ6NXT2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 AC026271.3-201ENST00000571884 352 ntBASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3CQ6NXT2 AC079598.2-202ENST00000546624 1451 ntBASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.07■□□□□ 0.48
H3F3CQ6NXT2 FEM1AP1-201ENST00000431297 1995 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms