Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF220Q5VTB9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 AC092720.2-201ENST00000602388 1665 ntBASIC18.81■□□□□ 0.6
RNF220Q5VTB9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 AC135050.7-201ENST00000624508 2218 ntBASIC18.81■□□□□ 0.6
RNF220Q5VTB9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF220Q5VTB9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF220Q5VTB9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 CDV3P1-201ENST00000471403 739 ntBASIC18.79■□□□□ 0.6
RNF220Q5VTB9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 AC087623.3-201ENST00000607047 1098 ntBASIC18.79■□□□□ 0.6
RNF220Q5VTB9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF220Q5VTB9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF220Q5VTB9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms