Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.11■□□□□ 0.65
RIF1Q5UIP0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.11■□□□□ 0.65
RIF1Q5UIP0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.11■□□□□ 0.65
RIF1Q5UIP0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 IL9RP2-201ENST00000423948 1312 ntBASIC19.1■□□□□ 0.65
RIF1Q5UIP0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.1■□□□□ 0.65
RIF1Q5UIP0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 HLA-G-203ENST00000376818 1127 ntBASIC19.09■□□□□ 0.65
RIF1Q5UIP0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 TSSC2-201ENST00000450217 709 ntBASIC19.09■□□□□ 0.65
RIF1Q5UIP0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 PMS2P2-201ENST00000425039 1128 ntBASIC19.09■□□□□ 0.65
RIF1Q5UIP0 AC005104.2-201ENST00000427818 678 ntBASIC19.09■□□□□ 0.65
RIF1Q5UIP0 TPSP2-201ENST00000561760 610 ntBASIC19.09■□□□□ 0.65
RIF1Q5UIP0 LINC01711-201ENST00000598340 967 ntBASIC19.09■□□□□ 0.65
RIF1Q5UIP0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
RIF1Q5UIP0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 HLA-A-209ENST00000638375 975 ntBASIC19.08■□□□□ 0.65
RIF1Q5UIP0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RIF1Q5UIP0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RIF1Q5UIP0 HLA-G-202ENST00000376815 851 ntBASIC19.08■□□□□ 0.64
RIF1Q5UIP0 RASA4DP-201ENST00000460726 1199 ntBASIC19.08■□□□□ 0.64
RIF1Q5UIP0 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.08■□□□□ 0.64
RIF1Q5UIP0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RIF1Q5UIP0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AL773604.1-201ENST00000617417 272 ntBASIC19.07■□□□□ 0.64
RIF1Q5UIP0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AC018553.1-201ENST00000616682 1458 ntBASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 DRAXINP1-201ENST00000437611 948 ntBASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AP003041.3-201ENST00000527151 707 ntBASIC19.07■□□□□ 0.64
RIF1Q5UIP0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AC064862.7-201ENST00000604520 867 ntBASIC19.07■□□□□ 0.64
RIF1Q5UIP0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.07■□□□□ 0.64
RIF1Q5UIP0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 TFP1-202ENST00000475455 1573 ntBASIC19.06■□□□□ 0.64
RIF1Q5UIP0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms