Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 POU5F1P3-201ENST00000428824 1078 ntBASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 AC026366.1-201ENST00000488803 879 ntBASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
KHDC1Q4VXA5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 KRT8P17-201ENST00000453110 1448 ntBASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KHDC1Q4VXA5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 AC233263.1-201ENST00000578059 224 ntBASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 AC124283.5-201ENST00000624661 1809 ntBASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KHDC1Q4VXA5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 KRT8P20-201ENST00000423953 1409 ntBASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.77■□□□□ 0.76
KHDC1Q4VXA5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
KHDC1Q4VXA5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
KHDC1Q4VXA5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KHDC1Q4VXA5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KHDC1Q4VXA5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
KHDC1Q4VXA5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KHDC1Q4VXA5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.76■□□□□ 0.75
KHDC1Q4VXA5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms