Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC3A1Q07837 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC3A1Q07837 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC3A1Q07837 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 CNN2P6-201ENST00000439038 900 ntBASIC17.58■□□□□ 0.4
SLC3A1Q07837 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC3A1Q07837 AL162412.1-201ENST00000567129 965 ntBASIC17.58■□□□□ 0.4
SLC3A1Q07837 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.58■□□□□ 0.4
SLC3A1Q07837 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC3A1Q07837 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC3A1Q07837 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC3A1Q07837 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC3A1Q07837 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC3A1Q07837 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 NCF1B-203ENST00000435988 1254 ntBASIC17.57■□□□□ 0.4
SLC3A1Q07837 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 AL591742.1-201ENST00000604433 565 ntBASIC17.57■□□□□ 0.4
SLC3A1Q07837 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC3A1Q07837 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC3A1Q07837 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 AC133552.2-202ENST00000575694 574 ntBASIC17.56■□□□□ 0.4
SLC3A1Q07837 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC3A1Q07837 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC3A1Q07837 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC3A1Q07837 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC3A1Q07837 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC3A1Q07837 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC3A1Q07837 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC3A1Q07837 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC3A1Q07837 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC3A1Q07837 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC3A1Q07837 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC3A1Q07837 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC3A1Q07837 SLC29A4P1-201ENST00000398760 971 ntBASIC17.55■□□□□ 0.4
SLC3A1Q07837 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC3A1Q07837 HLA-L-209ENST00000420110 1011 ntBASIC17.55■□□□□ 0.4
SLC3A1Q07837 CDV3P1-201ENST00000471403 739 ntBASIC17.55■□□□□ 0.4
SLC3A1Q07837 AF201337.1-201ENST00000520239 748 ntBASIC17.55■□□□□ 0.4
SLC3A1Q07837 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC3A1Q07837 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC3A1Q07837 AL109923.1-201ENST00000618799 583 ntBASIC17.55■□□□□ 0.4
SLC3A1Q07837 OR10C1-204ENST00000622521 1039 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms